CRAN/E | fpc

fpc

Flexible Procedures for Clustering

Installation

About

Various methods for clustering and cluster validation. Fixed point clustering. Linear regression clustering. Clustering by merging Gaussian mixture components. Symmetric and asymmetric discriminant projections for visualisation of the separation of groupings. Cluster validation statistics for distance based clustering including corrected Rand index. Standardisation of cluster validation statistics by random clusterings and comparison between many clustering methods and numbers of clusters based on this. Cluster-wise cluster stability assessment. Methods for estimation of the number of clusters: Calinski-Harabasz, Tibshirani and Walther's prediction strength, Fang and Wang's bootstrap stability. Gaussian/multinomial mixture fitting for mixed continuous/categorical variables. Variable-wise statistics for cluster interpretation. DBSCAN clustering. Interface functions for many clustering methods implemented in R, including estimating the number of clusters with kmeans, pam and clara. Modality diagnosis for Gaussian mixtures. For an overview see package?fpc.

www.unibo.it/sitoweb/christian.hennig/en/

Key Metrics

Version 2.2-10
R ≥ 2.0
Published 2023-01-07 147 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks fpc results

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Maintainer

Maintainer

Christian Hennig

christian.hennig@unibo.it

Authors

Christian Hennig

Material

Reference manual
Package source

In Views

Cluster

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

fpc archive

Depends

R ≥ 2.0

Imports

MASS
cluster
mclust
flexmix
prabclus
class
diptest
robustbase
kernlab
grDevices
graphics
methods
stats
utils
parallel

Suggests

tclust
pdfCluster
mvtnorm

Reverse Depends

evaluomeR
omada
wskm

Reverse Imports

adductomicsR
beadplexr
bootcluster
Canek
clustrd
coca
conclus
conjoint
dann
DIscBIO
FADPclust
FuseSOM
immunarch
IPCAPS
Linnorm
MEGENA
MineICA
MLInterfaces
MMUPHin
NIMAA
nullabor
OMICsPCA
pathfindR
RaceID
robCompositions
RPANDA
sae.prop
scone
semiArtificial
seqArchR
SPARTAAS
stream
truh
tspmeta
uSORT

Reverse Suggests

dbscan
dendextend
fdm2id
liayson
mlr
MOSS
opticskxi
parameters
rattle
simplifyEnrichment
trimcluster