CRAN/E | RPANDA

RPANDA

Phylogenetic ANalyses of DiversificAtion

Installation

About

Implements macroevolutionary analyses on phylogenetic trees. See Morlon et al. (2010) doi:10.1371/journal.pbio.1000493, Morlon et al. (2011) doi:10.1073/pnas.1102543108, Condamine et al. (2013) doi:10.1111/ele.12062, Morlon et al. (2014) doi:10.1111/ele.12251, Manceau et al. (2015) doi:10.1111/ele.12415, Lewitus & Morlon (2016) doi:10.1093/sysbio/syv116, Drury et al. (2016) doi:10.1093/sysbio/syw020, Manceau et al. (2016) doi:10.1093/sysbio/syw115, Morlon et al. (2016) doi:10.1111/2041-210X.12526, Clavel & Morlon (2017) doi:10.1073/pnas.1606868114, Drury et al. (2017) doi:10.1093/sysbio/syx079, Lewitus & Morlon (2017) doi:10.1093/sysbio/syx095, Drury et al. (2018) doi:10.1371/journal.pbio.2003563, Clavel et al. (2019) doi:10.1093/sysbio/syy045, Maliet et al. (2019) doi:10.1038/s41559-019-0908-0, Billaud et al. (2019) doi:10.1093/sysbio/syz057, Lewitus et al. (2019) doi:10.1093/sysbio/syz061, Aristide & Morlon (2019) doi:10.1111/ele.13385, Maliet et al. (2020) doi:10.1111/ele.13592, Drury et al. (2021) doi:10.1371/journal.pbio.3001270, Perez-Lamarque & Morlon (2022) doi:10.1111/mec.16478, Perez-Lamarque et al. (2022) doi:10.1101/2021.08.30.458192, Mazet et al. (2023) doi:10.1111/2041-210X.14195, Drury et al. (2024) doi:10.1016/j.cub.2023.12.055.

Citation RPANDA citation info
github.com/hmorlon/PANDA

Key Metrics

Version 2.3
R ≥ 3.5.0
Published 2024-02-21 64 days ago
Needs compilation? yes
License GPL-2
CRAN checks RPANDA results

Downloads

Yesterday 24 0%
Last 7 days 107 -27%
Last 30 days 515 -33%
Last 90 days 1.791 +19%
Last 365 days 6.150 -5%

Maintainer

Maintainer

Hélène Morlon

helene.morlon@bio.ens.psl.eu

Authors

Hélène Morlon

aut / cre / cph

Eric Lewitus

aut / cph

Fabien Condamine

aut / cph

Marc Manceau

aut / cph

Julien Clavel

aut / cph

Jonathan Drury

aut / cph

Olivier Billaud

aut / cph

Odile Maliet

aut / cph

Leandro Aristide

aut / cph

Benoit Perez-Lamarque

aut / cph

Nathan Mazet

aut / cph

Material

README
Reference manual
Package source

In Views

Phylogenetics

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

RPANDA archive

Depends

R ≥ 3.5.0
ape
picante
methods

Imports

BB
bipartite
cluster
coda
deSolve
fields
fpc
geiger
glassoFast
graphics
grDevices
igraph
Matrix
mvtnorm
mvMORPH ≥ 1.1.6
GUniFrac
parallel
ParallelLogger
phangorn
phytools
pracma
pspline
pvclust
raster
RColorBrewer
R.utils
Rmpfr
stats
TESS
utils
vegan

Suggests

testthat

Reverse Suggests

nodeSub
treestats