CRAN/E | MEGENA

MEGENA

Multiscale Clustering of Geometrical Network

Installation

About

Co-Expression Network Analysis by adopting network embedding technique. Song W.-M., Zhang B. (2015) Multiscale Embedded Gene Co-expression Network Analysis. PLoS Comput Biol 11(11): e1004574. doi:10.1371/journal.pcbi.1004574.

github.com/songw01/MEGENA

Key Metrics

Version 1.3.7
R ≥ 3.4.0
Published 2018-09-10 2026 days ago
Needs compilation? yes
License GPL (≥ 3)
CRAN checks MEGENA results

Downloads

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Last 30 days 235 +4%
Last 90 days 886 +10%
Last 365 days 3.375 -13%

Maintainer

Maintainer

Won-Min Song

wonmin1984@gmail.com

Authors

Won-Min Song
Bin Zhang

Material

README
Reference manual
Package source

Vignettes

MEGENA pipeline overview

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

MEGENA archive

Depends

R ≥ 3.4.0
doParallel ≥ 1.0.11
foreach ≥ 1.4.4
igraph ≥ 1.2.1

Imports

Rcpp ≥ 0.11.3
Matrix ≥ 1.1-5
ggplot2 ≥ 1.0.0
reshape ≥ 0.8.5
fpc ≥ 2.1-11
cluster ≥ 2.0.7-1
ggrepel ≥0.5
ggraph ≥ 1.0.1

Suggests

knitr
rmarkdown

LinkingTo

Rcpp
BH

Reverse Imports

DDPNA

Reverse Suggests

DGCA