CRAN/E | tracerer

tracerer

Tracer from R

Installation

About

'BEAST2' () is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'Tracer' () is a GUI tool to parse and analyze the files generated by 'BEAST2'. This package provides a way to parse and analyze 'BEAST2' input files without active user input, but using R function calls instead.

Citation tracerer citation info
docs.ropensci.org/tracerer/ (website) https://github.com/ropensci/tracerer/
docs.ropensci.org/tracerer/ (website) https://github.com/ropensci/tracerer/
Bug report File report

Key Metrics

Version 2.2.3
Published 2023-09-27 213 days ago
Needs compilation? yes
License GPL-3
CRAN checks tracerer results
Language en-US

Downloads

Yesterday 18 0%
Last 7 days 52 -4%
Last 30 days 240 -13%
Last 90 days 856 -39%
Last 365 days 4.406 -23%

Maintainer

Maintainer

Richèl J.C. Bilderbeek

richel@richelbilderbeek.nl

Authors

Richèl J.C. Bilderbeek

aut / cre

Joëlle Barido-Sottani

rev

(Joëlle reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209)

David Winter

rev

(David reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209)

Material

Reference manual
Package source

In Views

Phylogenetics

Vignettes

tracerer versus Tracer demo

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

tracerer archive

Imports

jsonlite
Rcpp
testit

Suggests

ape
ggplot2
hunspell
knitr
markdown
phangorn
rappdirs
rbenchmark
reshape2
rmarkdown
spelling
stringr
testthat ≥ 2.1.0

LinkingTo

Rcpp

Reverse Depends

babette

Reverse Imports

nodeSub
pirouette

Reverse Suggests

beastier
mcbette