CRAN/E | hypervolume

hypervolume

High Dimensional Geometry, Set Operations, Projection, and Inference Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls

Installation

About

Estimates the shape and volume of high-dimensional datasets and performs set operations: intersection / overlap, union, unique components, inclusion test, and hole detection. Uses stochastic geometry approach to high-dimensional kernel density estimation, support vector machine delineation, and convex hull generation. Applications include modeling trait and niche hypervolumes and species distribution modeling.

Key Metrics

Version 3.1.3
R ≥ 3.5.0
Published 2023-09-14 225 days ago
Needs compilation? yes
License GPL-3
CRAN checks hypervolume results

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Maintainer

Maintainer

Benjamin Blonder

benjamin.blonder@berkeley.edu

Authors

Benjamin Blonder
Cecina Babich Morrow
Stuart Brown
Gregoire Butruille
Daniel Chen
Alex Laini
David J. Harris

Material

Reference manual
Package source

Vignettes

Hypervolume-Resampling
Introduction to occupancy

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

hypervolume archive

Depends

Rcpp
methods
R ≥ 3.5.0

Imports

raster
maps
MASS
geometry
ks
hitandrun
pdist
fastcluster
compiler
e1071
progress
mvtnorm
data.table
terra
sp
foreach
doParallel
parallel
ggplot2
pbapply
palmerpenguins
purrr
dplyr
caret

Suggests

rgl
magick
alphahull
knitr
rmarkdown
gridExtra

LinkingTo

Rcpp
RcppArmadillo
progress

Reverse Imports

BAT
cati
Ostats
raptr

Reverse Suggests

TreeDist