CRAN/E | dynplot

dynplot

Visualising Single-Cell Trajectories

Installation

About

Visualise a single-cell trajectory as a graph or dendrogram, as a dimensionality reduction or heatmap of the expression data, or a comparison between two trajectories as a pairwise scatterplot or dimensionality reduction projection. Saelens and Cannoodt et al. (2019) doi:10.1038/s41587-019-0071-9.

github.com/dynverse/dynplot
Bug report File report

Key Metrics

Version 1.1.2
R ≥ 3.0.0
Published 2021-12-07 871 days ago
Needs compilation? no
License MIT
License File
CRAN checks dynplot results

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Maintainer

Maintainer

Robrecht Cannoodt

rcannood@gmail.com

Authors

Robrecht Cannoodt

aut / cre / cph

Wouter Saelens

aut

Material

NEWS
Reference manual
Package source

Vignettes

generate_file_from_container(x)

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

dynplot archive

Depends

R ≥ 3.0.0

Imports

assertthat
dplyr
dynutils ≥ 1.0.2
dynfeature ≥ 1.0.0
dyndimred ≥ 1.0.0
dynwrap ≥ 1.0.0
GA
ggforce
ggplot2 ≥ 3.0
ggraph ≥ 2.0
ggrepel
igraph
MASS
methods
patchwork
purrr
reshape2
tibble
tidyr
tidygraph
vipor

Suggests

covr
hexbin
knitr
RColorBrewer
rje
rmarkdown
testthat ≥ 3.0.0
uwot