CRAN/E | comradesOO

comradesOO

Analysis of COMRADES (Cross-Linking Matched RNA and Deep Sequencing) Data

Installation

About

Analysis of RNA crosslinking data for RNA structure prediction. The package is suitable for the analysis of RNA structure cross-linking data and chemical probing data.

Citation comradesOO citation info
Bug report File report

Key Metrics

Version 0.1.1
Published 2023-11-10 175 days ago
Needs compilation? no
License GPL-3
CRAN checks comradesOO results

Downloads

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Last 7 days 48 -6%
Last 30 days 172 -14%
Last 90 days 515 -21%
Last 365 days 1.191

Maintainer

Maintainer

Jonathan Price

jlp76@cam.ac.uk

Authors

Jonathan Price

aut / cre

Material

README
Reference manual
Package source

Vignettes

comradessOO

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Old Sources

comradesOO archive

Depends

seqinr
GenomicRanges
stats

Imports

ggplot2
reshape2
MASS
mixtools
utils
S4Vectors
doParallel
igraph
R4RNA
RColorBrewer
IRanges
foreach
grDevices
heatmap3
TopDom
tidyverse
RRNA
ggrepel
methods
parallel

Suggests

knitr
rmarkdown
testthat ≥ 3.0.0