CRAN/E | TOmicsVis

TOmicsVis

Transcriptome Visualization Process Scheme

Installation

About

Transcriptome visualization from sample trait statistics to gene expression analysis. Six categories include "Samples Statistics", "Traits Analysis", "Differential Expression Analysis", "Advanced Analysis", "GO and KEGG Enrichment", "Tables Operations", with complete sample data.

benben-miao.github.io/TOmicsVis/
Bug report File report

Key Metrics

Version 2.0.0
R ≥ 3.5
Published 2023-08-28 245 days ago
Needs compilation? no
License MIT
License File
CRAN checks TOmicsVis results

Downloads

Yesterday 5 0%
Last 7 days 60 -3%
Last 30 days 211 -15%
Last 90 days 645 -17%
Last 365 days 2.490

Maintainer

Maintainer

Benben Miao

benben.miao@outlook.com

Authors

Benben Miao

aut / cre

Wei Dong

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

Tutorials

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

TOmicsVis archive

Depends

R ≥ 3.5
Biobase ≥ 2.5.5
e1071 ≥ 1.7-0

Imports

stats
utils
grid
graphics
grDevices
ggplot2
ggsci
reshape2
ggpubr
ggcorrplot
ggforce
vegan
venn
UpSetR
circlize
randomcoloR
ComplexHeatmap
EnhancedVolcano
GGally
survival
survminer
Rtsne
umap
dplyr
tidyr
clusterProfiler
enrichplot
ggnewscale
igraph
WGCNA
stringr
pheatmap
RColorBrewer
ggpolypath
factoextra
ggrepel
cowplot
ggplotify
plotrix
Mfuzz
shiny

Suggests

knitr
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