CRAN/E | BCClong

BCClong

Bayesian Consensus Clustering for Multiple Longitudinal Features

Installation

About

It is very common nowadays for a study to collect multiple features and appropriately integrating multiple longitudinal features simultaneously for defining individual clusters becomes increasingly crucial to understanding population heterogeneity and predicting future outcomes. 'BCClong' implements a Bayesian consensus clustering (BCC) model for multiple longitudinal features via a generalized linear mixed model. Compared to existing packages, several key features make the 'BCClong' package appealing: (a) it allows simultaneous clustering of mixed-type (e.g., continuous, discrete and categorical) longitudinal features, (b) it allows each longitudinal feature to be collected from different sources with measurements taken at distinct sets of time points (known as irregularly sampled longitudinal data), (c) it relaxes the assumption that all features have the same clustering structure by estimating the feature-specific (local) clusterings and consensus (global) clustering.

Citation BCClong citation info

Key Metrics

Version 1.0.2
R ≥ 3.5.0
Published 2024-02-05 81 days ago
Needs compilation? yes
License MIT
License File
CRAN checks BCClong results

Downloads

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Last 30 days 197 -22%
Last 90 days 717 +1%
Last 365 days 2.659 +247%

Maintainer

Maintainer

Zhiwen Tan

21zt9@queensu.ca

Authors

Zhiwen Tan

aut / cre

Zihang Lu

ctb

Chang Shen

ctb

Material

Reference manual
Package source

Vignettes

ContinuousData
MixedTypeData

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

BCClong archive

Depends

R ≥ 3.5.0

Imports

cluster
coda
ggplot2
graphics
label.switching
LaplacesDemon
lme4
MASS
mclust
MCMCpack
mixAK
mvtnorm
nnet
Rcpp ≥ 1.0.9
Rmpfr
stats
truncdist
abind

Suggests

cowplot
joineRML
knitr
rmarkdown
survival
survminer
testthat ≥ 3.0.0

LinkingTo

Rcpp
RcppArmadillo