CRAN/E | coda

coda

Output Analysis and Diagnostics for MCMC

Installation

About

Provides functions for summarizing and plotting the output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests of convergence to the equilibrium distribution of the Markov chain.

Citation coda citation info

Key Metrics

Version 0.19-4
R ≥ 2.14.0
Published 2020-09-30 1154 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks coda results

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Maintainer

Maintainer

Martyn Plummer

martyn.plummer@gmail.com

Authors

Martyn Plummer

aut / cre / trl

Nicky Best

aut

Kate Cowles

aut

Karen Vines

aut

Deepayan Sarkar

aut

Douglas Bates

aut

Russell Almond

aut

Arni Magnusson

aut

Material

README
ChangeLog
Reference manual
Package source

In Views

Bayesian
GraphicalModels

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

coda archive

Depends

R ≥ 2.14.0

Imports

lattice

Reverse Depends

adaptMCMC
ArchaeoChron
ArchaeoPhases
bamlss
BayesARIMAX
bayesDccGarch
BayesFactor
BayesLCA
BayesSAE
bayesSurv
BayesTwin
BayLum
BAYSTAR
bhm
bhpm
bkmrhat
blatent
BMAmevt
boral
BSPADATA
bvartools
c212
coalescentMCMC
cplm
cubfits
dclone
DPP
elrm
endorse
EpiILM
EpiILMCT
FME
gaga
gconsensus
gemtc
gfiExtremes
HelpersMG
Hmsc
ICBayes
icenReg
InSilicoVA
lira
MasterBayes
MCMC.OTU
MCMC.qpcr
MCMCglmm
MCMCpack
mcmcplots
MCMCtreeR
metropolis
Load all 69 items
(warning: might lead to performance issues and take some time)

Reverse Imports

agRee
AHMbook
altmeta
ammiBayes
aphylo
apollo
apTreeshape
arm
auRoc
BaalChIP
BAMBI
bamp
banocc
BANOVA
BASiCS
BayesBinMix
bayesbr
BayesCACE
BayesComm
bayescount
BayesFM
bayesGARCH
BayesGWQS
BayesianTools
bayesLife
bayeslm
BayesLN
BayesMassBal
BayesMFSurv
bayesmix
BayesOrdDesign
bayesPO
BayesPostEst
Bayesrel
BayesRS
BayesSpace
BayesSPsurv
bayesTFR
BayesTools
bayesvl
BayesX
bcgam
BCHM
Bchron
bdpopt
BDWreg
Bergm
BEST
bfw
bgsmtr
Load all 262 items
(warning: might lead to performance issues and take some time)

Reverse Suggests

AdMit
afdx
airGR
amen
AnaCoDa
BaM
bandle
bayesanova
bayesImageS
bayest
BCEA
bcp
BGGE
bmstdr
broom
bsreg
BVAR
camtrapR
embryogrowth
emmeans
ergmito
factorstochvol
gap
ggmcmc
glmmfields
glmmTMB
HDInterval
icensBKL
LAM
lmls
LNIRT
Luminescence
MBNMAdose
mcmcderive
mcmcensemble
mcmcsae
metamisc
miceadds
nimbleAPT
nimbleNoBounds
nimbleSCR
nmathresh
noisyCE2
outbreaker2
polyfreqs
pscl
purgeR
R2BayesX
rater
rbi
Load all 68 items
(warning: might lead to performance issues and take some time)

Reverse Enhances

XDE