CRAN/E | xROI

xROI

Delineate Region of Interests (ROI's) and Extract Time-Series Data from Digital Repeat Photography Images

Installation

About

Digital repeat photography and near-surface remote sensing have been used by environmental scientists to study the environmental change for nearly a decade. However, a user-friendly, reliable, and robust platform to extract color-based statistics and time-series from a large stack of images is still lacking. Here, we present an interactive open-source toolkit, called 'xROI', that facilitate the process time-series extraction and improve the quality of the final data. 'xROI' provides a responsive environment for scientists to interactively a) delineate regions of interest (ROI), b) handle field of view (FOV) shifts, and c) extract and export time series data characterizing image color (i.e. red, green and blue channel digital numbers for the defined ROI). Using 'xROI', user can detect FOV shifts without minimal difficulty. The software gives user the opportunity to readjust the mask files or redraw new ones every time an FOV shift occurs. 'xROI' helps to significantly improve data accuracy and continuity.

Citation xROI citation info
Bug report File report

Key Metrics

Version 0.9.20
R ≥ 4.0.0
Published 2021-06-02 1065 days ago
Needs compilation? no
License AGPL-3
CRAN checks xROI results

Downloads

Yesterday 22 +1000%
Last 7 days 53 +66%
Last 30 days 149 +2%
Last 90 days 436 -15%
Last 365 days 2.697 -38%

Maintainer

Maintainer

Bijan Seyednasrollah

bijan.s.nasr@gmail.com

Authors

Bijan Seyednasrollah
Thomas Milliman
Andrew D. Richardson

Material

README
NEWS
Reference manual
Package source

Vignettes

Launch xROI

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

xROI archive

Depends

R ≥ 4.0.0

Imports

colourpicker
data.table
graphics
jpeg
lubridate
methods
moments
RCurl
raster
rgdal
rjson
sp
stats
stringr
tiff
utils
shiny
shinyjs

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