CRAN/E | webSDM

webSDM

Including Known Interactions in Species Distribution Models

Installation

About

A collection of tools to fit and work with trophic Species Distribution Models. Trophic Species Distribution Models combine knowledge of trophic interactions with Bayesian structural equation models that model each species as a function of its prey (or predators) and environmental conditions. It exploits the topological ordering of the known trophic interaction network to predict species distribution in space and/or time, where the prey (or predator) distribution is unavailable. The method implemented by the package is described in Poggiato, Andréoletti, Pollock and Thuiller (2022) doi:10.22541/au.166853394.45823739/v1.

github.com/giopogg/webSDM
giopogg.github.io/webSDM/
Bug report File report

Key Metrics

Version 1.1-4
R ≥ 3.5.0
Published 2023-09-18 224 days ago
Needs compilation? no
License GPL-3
CRAN checks webSDM results

Downloads

Yesterday 9 0%
Last 7 days 70 +15%
Last 30 days 194 -3%
Last 90 days 577 -25%
Last 365 days 2.446 +153%

Maintainer

Maintainer

Giovanni Poggiato

giov.poggiato@gmail.com

Authors

Giovanni Poggiato

aut / cre / cph

Jérémy Andréoletti

aut

Material

NEWS
Reference manual
Package source

Vignettes

Composite variables and biotic-abiotic interactions
Subtle and obvious differences between SDM and trophic SDM
Introduction to trophic SDM

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

webSDM archive

Depends

R ≥ 3.5.0

Imports

GGally
abind
bayesplot
brms
broom.mixed
dismo
dplyr
ggplot2
glmnet
gridExtra
igraph
jtools
rstanarm
rstantools
utils

Suggests

knitr
rmarkdown
reshape2
devtools
loo
randomForest
network
sna
scales
intergraph