CRAN/E | warbleR

warbleR

Streamline Bioacoustic Analysis

Installation

About

Functions aiming to facilitate the analysis of the structure of animal acoustic signals in 'R'. 'warbleR' makes use of the basic sound analysis tools from the package 'seewave', and offers new tools for acoustic structure analysis. The main features of the package are the use of loops to apply tasks through acoustic signals referenced in a selection (annotation) table and the production of spectrograms in image files that allow to organize data and verify acoustic analyzes. The package offers functions to explore, organize and manipulate multiple sound files, explore and download 'Xeno-Canto' recordings, detect signals automatically, create spectrograms of complete recordings or individual signals, run different measures of acoustic signal structure, evaluate the performance of measurement methods, catalog signals, characterize different structural levels in acoustic signals, run statistical analysis of duet coordination and consolidate databases and annotation tables, among others.

Citation warbleR citation info
marce10.github.io/warbleR/
System requirements fftw3, GNU make, sox, Ghostscript, libsndfile, GDAL
Bug report File report

Key Metrics

Version 1.1.30
R ≥ 3.2.1
Published 2024-01-23 93 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks warbleR results
Language en-US

Downloads

Yesterday 22 -21%
Last 7 days 151 -39%
Last 30 days 940 -16%
Last 90 days 3.278 -6%
Last 365 days 13.660 +34%

Maintainer

Maintainer

Marcelo Araya-Salas

marcelo.araya@ucr.ac.cr

Authors

Marcelo Araya-Salas

aut / cre

Grace Smith-Vidaurre

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

1. Introduction to warbleR
2. Import sound files and select signals
3. Visual inspection and signal classification
4. Acoustic (dis)similarity, coordinated singing and simulating songs

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

warbleR archive

Depends

R ≥ 3.2.1
tuneR
seewave ≥ 2.0.1
NatureSounds

Imports

dtw
fftw
graphics
grDevices
monitoR
parallel
pbapply
RCurl
rjson
stats
utils
methods
Rcpp
knitr
bioacoustics
cli
testthat ≥ 3.0.0

Suggests

ggplot2
rmarkdown
jpeg
ape
soundgen
wavethresh
png
pracma
Sim.DiffProc
maps
leaflet
kableExtra
covr

LinkingTo

Rcpp

Reverse Depends

baRulho

Reverse Imports

ohun
Rraven