CRAN/E | voluModel

voluModel

Modeling Species Distributions in Three Dimensions

Installation

About

Facilitates modeling species' ecological niches and geographic distributions based on occurrences and environments that have a vertical as well as horizontal component, and projecting models into three-dimensional geographic space. Working in three dimensions is useful in an aquatic context when the organisms one wishes to model can be found across a wide range of depths in the water column. The package also contains functions to automatically generate marine training model training regions using machine learning, and interpolate and smooth patchily sampled environmental rasters using thin plate splines. Davis Rabosky AR, Cox CL, Rabosky DL, Title PO, Holmes IA, Feldman A, McGuire JA (2016) doi:10.1038/ncomms11484. Nychka D, Furrer R, Paige J, Sain S (2021) doi:10.5065/D6W957CT. Pateiro-Lopez B, Rodriguez-Casal A (2022) .

Citation voluModel citation info
hannahlowens.github.io/voluModel/
Bug report File report

Key Metrics

Version 0.2.1
R ≥ 4.0.0
Published 2024-01-24 65 days ago
Needs compilation? no
License GPL-3
CRAN checks voluModel results

Downloads

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Maintainer

Maintainer

Hannah L. Owens

hannah.owens@gmail.com

Authors

Hannah L. Owens

aut / cre

Carsten Rahbek

aut

Material

NEWS
Reference manual
Package source

Vignettes

1. Introduction to 'voluModel'
2. Processing Raster Data
3. Environmental Data Sampling
4. Visualization Tools
5. 3D Niche Modeling with the GLM Algorithm

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

voluModel archive

Depends

R ≥ 4.0.0

Imports

dplyr
fields
ggplot2
ggtext
grDevices
methods
modEvA
rangeBuilder ≥ 2.0
terra
viridisLite
sf

Suggests

testthat ≥ 3.0.0
nlme
knitr
covr
gridExtra
lattice
rmarkdown
rnaturalearth
rnaturalearthdata
tibble