CRAN/E | treestats

treestats

Phylogenetic Tree Statistics

Installation

About

Collection of phylogenetic tree statistics, collected throughout the literature. All functions have been written to maximize computation speed. The package includes umbrella functions to calculate all statistics, all balance associated statistics, or all branching time related statistics. Furthermore, the 'treestats' package supports summary statistic calculations on Ltables, provides speed-improved coding of branching times, Ltable conversion and includes algorithms to create intermediately balanced trees. Full description can be found in Janzen (2023) doi:10.1101/2024.01.24.576848.

Citation treestats citation info
github.com/thijsjanzen/treestats
Bug report File report

Key Metrics

Version 1.0.5
Published 2024-01-30 95 days ago
Needs compilation? yes
License GPL-3
CRAN checks treestats results

Downloads

Yesterday 5 -58%
Last 7 days 83 -3%
Last 30 days 248 +23%
Last 90 days 611 +32%
Last 365 days 1.051

Maintainer

Maintainer

Thijs Janzen

thijsjanzen@gmail.com

Authors

Thijs Janzen

cre / aut

Material

README
NEWS
Reference manual
Package source

Vignettes

demonstration

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

treestats archive

Depends

Rcpp

Imports

ape
nloptr
RSpectra
Matrix

Suggests

phyloTop
testthat
DDD
geiger
nodeSub
nLTT
castor
adephylo
ggplot2
tibble
picante
treebalance
RPANDA
lintr
rmarkdown
knitr

LinkingTo

Rcpp
nloptr