CRAN/E | treefit

treefit

The First Software for Quantitative Trajectory Inference

Installation

About

Perform two types of analysis: 1) checking the goodness-of-fit of tree models to your single-cell gene expression data; and 2) deciding which tree best fits your data.

hayamizu-lab.github.io/treefit-r/
github.com/hayamizu-lab/treefit-r/
Bug report File report

Key Metrics

Version 1.0.2
Published 2022-01-18 828 days ago
Needs compilation? no
License GPL (≥ 3)
CRAN checks treefit results
Language en-US

Downloads

Yesterday 5 -50%
Last 7 days 42 -2%
Last 30 days 168 -1%
Last 90 days 512 -27%
Last 365 days 2.261 -19%

Maintainer

Maintainer

Kouhei Sutou

kou@clear-code.com

Authors

Momoko Hayamizu

aut

Kouhei Sutou

aut / cre

Ryohei Suzuki

aut

Hiromi Ishii

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

Treefit - Getting started
Treefit - Working with Seurat

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

treefit archive

Imports

ggplot2
igraph
patchwork
pracma

Suggests

Seurat
gridExtra
knitr
plotly
qpdf
rmarkdown
testthat