CRAN/E | tmod

tmod

Feature Set Enrichment Analysis for Metabolomics and Transcriptomics

Installation

About

Methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis. See Zyla et al (2019) doi:10.1093/bioinformatics/btz447.

Citation tmod citation info
tmod.online
github.com/january3/tmod/
january3.github.io/tmod/

Key Metrics

Version 0.50.13
R ≥ 2.10
Published 2023-03-31 401 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks tmod results

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Maintainer

Maintainer

January Weiner

january.weiner@gmail.com

Authors

January Weiner

aut / cre

Material

README
ChangeLog
Reference manual
Package source

Vignettes

tmod: Analysis of Gene Set Enrichments

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

tmod archive

Depends

R ≥ 2.10

Imports

beeswarm
tagcloud
XML
methods
plotwidgets
RColorBrewer
gplots
tibble
pheatmap
ggplot2
tidyr
purrr
rlang
tidyselect
ggrepel

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