CRAN/E | tidytree

tidytree

A Tidy Tool for Phylogenetic Tree Data Manipulation

Installation

About

Phylogenetic tree generally contains multiple components including node, edge, branch and associated data. 'tidytree' provides an approach to convert tree object to tidy data frame as well as provides tidy interfaces to manipulate tree data.

Citation tidytree citation info
www.amazon.com/Integration-Manipulation-Visualization-Phylogenetic-Computational-ebook/dp/B0B5NLZR1Z/
Bug report File report

Key Metrics

Version 0.4.6
R ≥ 3.4.0
Published 2023-12-12 139 days ago
Needs compilation? no
License Artistic-2.0
CRAN checks tidytree results

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Maintainer

Maintainer

Guangchuang Yu

guangchuangyu@gmail.com

Authors

Guangchuang Yu

aut / cre / cph

Bradley Jones

ctb

Zebulun Arendsee

ctb

Material

NEWS
Reference manual
Package source

In Views

Phylogenetics

Vignettes

tidytree

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

tidytree archive

Depends

R ≥ 3.4.0

Imports

ape
dplyr
lazyeval
magrittr
methods
rlang
tibble
tidyr
tidyselect
yulab.utils ≥ 0.0.4
pillar
cli

Suggests

knitr
rmarkdown
prettydoc
testthat
utils

Reverse Imports

ggtree
ggtreeDendro
ggtreeExtra
miaViz
microbiomeMarker
MicrobiotaProcess
oppr
RevGadgets
shinyTempSignal
sitePath
treeio

Reverse Suggests

compcodeR
DAISIE
nosoi