CRAN/E | tidysq

tidysq

Tidy Processing and Analysis of Biological Sequences

Installation

About

A tidy approach to analysis of biological sequences. All processing and data-storage functions are heavily optimized to allow the fastest and most efficient data storage.

github.com/BioGenies/tidysq
System requirements GNU make, C++17
Bug report File report

Key Metrics

Version 1.1.3
R ≥ 3.0.0
Published 2022-01-31 823 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks tidysq results
Language en-US

Downloads

Yesterday 14 0%
Last 7 days 62 +9%
Last 30 days 208 -4%
Last 90 days 559 -29%
Last 365 days 2.451 -7%

Maintainer

Maintainer

Dominik Rafacz

dominikrafacz@gmail.com

Authors

Dominik Rafacz

cre / aut

Michal Burdukiewicz

aut

Laura Bakala

aut

Leon Eyrich Jessen

ctb

Stefan Roediger

ctb

Jadwiga Slowik

ctb

Weronika Puchala

ctb

Katarzyna Sidorczuk

ctb

Filip Pietluch

ctb

Jaroslaw Chilimoniuk

ctb

Material

README
NEWS
Reference manual
Package source

Vignettes

Advanced alphabet techniques
Quick Start

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

tidysq archive

Depends

R ≥ 3.0.0

Imports

checkmate ≥ 1.9.0
cli ≥ 2.0.0
crayon ≥ 1.3.4
dplyr ≥ 1.0.2
pillar ≥ 1.4.2
Rcpp ≥ 1.0.1
tibble ≥2.1.3
vctrs ≥ 0.3.0

Suggests

ape ≥ 5.3
bioseq ≥ 0.1.2
Biostrings ≥ 2.52.0
covr
knitr
lifecycle
purrr
seqinr ≥ 3.4-5
spelling
rmarkdown
testthat ≥ 3.0.0
withr ≥ 2.2.0
rlang
mockr

LinkingTo

Rcpp
testthat