CRAN/E | tcgaViz

tcgaViz

Visualization Tool for the Cancer Genome Atlas Program (TCGA)

Installation

About

Differential analysis of tumor tissue immune cell type abundance based on RNA-seq gene-level expression from The Cancer Genome Atlas (TCGA; ) database.

Key Metrics

Version 1.0.1
R ≥ 2.10
Published 2022-07-05 668 days ago
Needs compilation? no
License GPL-3
CRAN checks tcgaViz results
Language en-US

Downloads

Yesterday 13 0%
Last 7 days 62 -18%
Last 30 days 223 -7%
Last 90 days 633 -30%
Last 365 days 2.895 +43%

Maintainer

Maintainer

Etienne Camenen

etienne.camenen@gmail.com

Authors

Etienne Camenen

aut / cre

Gilles Marodon

aut

Nicolas Aubert

aut

Material

README
Reference manual
Package source

Vignettes

Tutorial

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

tcgaViz archive

Depends

R ≥ 2.10

Imports

config
data.table
dplyr
DT
ggplot2
ggpubr
golem
grDevices
magrittr
methods
openxlsx
plotly
readr
reshape2
rlang
rstatix
shiny
shinyFeedback
shinyjs
stats
stringr
tidyr
tidyselect
utils

Suggests

covr
knitr
rmarkdown
spelling
testthat