CRAN/E | swamp

swamp

Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations

Installation

About

Collection of functions to connect the structure of the data with the information on the samples. Three types of associations are covered: 1. linear model of principal components. 2. hierarchical clustering analysis. 3. distribution of features-sample annotation associations. Additionally, the inter-relation between sample annotations can be analyzed. Simple methods are provided for the correction of batch effects and removal of principal components.

Key Metrics

Version 1.5.1
Published 2019-12-06 1605 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks swamp results

Downloads

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Maintainer

Maintainer

Martin Lauss

martin.lauss@med.lu.se

Authors

Martin Lauss

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

swamp archive

Depends

impute
amap
gplots
MASS

Imports

methods

Reverse Imports

DExMA