CRAN/E | statgenMPP

statgenMPP

QTL Mapping for Multi Parent Populations

Installation

About

For Multi Parent Populations (MPP) Identity By Descend (IBD) probabilities are computed using Hidden Markov Models. These probabilities are then used in a mixed model approach for QTL Mapping as described in Li et al. (doi:10.1007/s00122-021-03919-7).

Citation statgenMPP citation info

Key Metrics

Version 1.0.2
R ≥ 3.6
Published 2022-12-02 513 days ago
Needs compilation? no
License GPL (≥ 3)
CRAN checks statgenMPP results

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Maintainer

Maintainer

Bart-Jan van Rossum

bart-jan.vanrossum@wur.nl

Authors

Wenhao Li

aut

Martin Boer

aut

Bart-Jan van Rossum

aut / cre

Fred van Eeuwijk

ctb

Material

README
NEWS
Reference manual
Package source

In Views

Agriculture

Vignettes

QTL Mapping in Multi-Parent Populations

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

statgenMPP archive

Depends

R ≥ 3.6
statgenGWAS ≥ 1.0.8

Imports

data.table
foreach
ggplot2
gridExtra
LMMsolver
Matrix
scales
spam
statgenIBD ≥ 1.0.4
stringi

Suggests

rmarkdown
knitr
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