CRAN/E | spatialTIME

spatialTIME

Spatial Analysis of Vectra Immunoflourescent Data

Installation

About

Visualization and analysis of Vectra Immunoflourescent data. Options for calculating both the univariate and bivariate Ripley's K are included. Calculations are performed using a permutation-based approach presented by Wilson et al. doi:10.1101/2021.04.27.21256104.

Citation spatialTIME citation info
github.com/FridleyLab/spatialTIME
Bug report File report

Key Metrics

Version 1.3.4-3
R ≥ 2.10
Published 2024-03-11 39 days ago
Needs compilation? no
License MIT
License File
CRAN checks spatialTIME results

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Maintainer

Maintainer

Fridley Lab

fridley.lab@moffitt.org

Authors

Jordan Creed

aut

Ram Thapa

aut

Christopher Wilson

aut

Alex Soupir

aut

Oscar Ospina

aut

Julia Wrobel

aut

Brooke Fridley

cph

Fridley Lab

cre

Material

README
Reference manual
Package source

Vignettes

Introduction to spatialTIME

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

spatialTIME archive

Depends

R ≥ 2.10

Imports

magrittr
dplyr
tidyr
ggplot2
scales
grDevices
purrr
spatstat.geom
spatstat.explore
RColorBrewer
furrr
future
tidyselect
crayon
pbmcapply
dixon
tibble
stringr

Suggests

knitr
devtools
rmarkdown
testthat ≥ 3.0.0
gridExtra
pheatmap

Reverse Suggests

scSpatialSIM