CRAN/E | spathial

spathial

Evolutionary Analysis

Installation

About

A generic tool for manifold analysis. It allows to infer a relevant transition or evolutionary path which can highlights the features involved in a specific process. 'spathial' can be useful in all the scenarios where the temporal (or pseudo-temporal) evolution is the main problem (e.g. tumor progression). The algorithm for finding the principal path is described in: Ferrarotti et al., (2019) doi:10.1109/TNNLS.2018.2884792."

Key Metrics

Version 0.1.2
R ≥ 3.5
Published 2020-04-10 1487 days ago
Needs compilation? no
License GPL-3
CRAN checks spathial results

Downloads

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Maintainer

Maintainer

Erika Gardini

erika.gardini4@unibo.it

Authors

Erika Gardini

aut / cre

Federico M. Giorgi

aut

Sergio Decherchi

aut

Andrea Cavalli

aut

Material

Reference manual
Package source

Vignettes

Spathial Package Vignette

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

spathial archive

Depends

R ≥ 3.5

Imports

pracma
igraph
matrixStats
MASS
Rtsne
class
utils
knitr
rmarkdown
irlba