CRAN/E | shinyExprPortal

shinyExprPortal

A Configurable 'shiny' Portal for Sharing Analysis of Molecular Expression Data

Installation

About

Enables deploying configuration file-based 'shiny' apps with minimal programming for interactive exploration and analysis showcase of molecular expression data. For exploration, supports visualization of correlations between rows of an expression matrix and a table of observations, such as clinical measures, and comparison of changes in expression over time. For showcase, enables visualizing the results of differential expression from package such as 'limma', co-expression modules from 'WGCNA' and lower dimensional projections.

c4tb.github.io/shinyExprPortal/
github.com/C4TB/shinyExprPortal
Bug report File report

Key Metrics

Version 1.1.0
R ≥ 3.5.0
Published 2024-02-06 86 days ago
Needs compilation? no
License MIT
License File
CRAN checks shinyExprPortal results

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Maintainer

Maintainer

Rafael Henkin

r.henkin@qmul.ac.uk

Authors

Rafael Henkin

cre / aut / cph

Material

README
NEWS
Reference manual
Package source

Vignettes

Full Configuration Guide
Portal UI and Code Customization
Data Preparation Guide
Quick Start Guide for shinyExprPortal

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

shinyExprPortal archive

Depends

R ≥ 3.5.0

Imports

config
stats
utils
shiny
htmltools
markdown
cli
dplyr
tidyr
yaml
data.table
bslib
iheatmapr
vegawidget
DT
qvalue
parallel
Rfast
rlang
shinyhelper

Suggests

testthat ≥ 3.0.0
whisker
knitr
rmarkdown
r2d3
kableExtra
RColorBrewer