CRAN/E | segregatr

segregatr

Segregation Analysis for Variant Interpretation

Installation

About

An implementation of the full-likelihood Bayes factor (FLB) for evaluating segregation evidence in clinical medical genetics. The method was introduced by Thompson et al. (2003) doi:10.1086/378100, and further popularised by Bayrak-Toydemir et al. (2008) doi:10.1016/j.yexmp.2008.03.006. This implementation allows custom penetrance values and liability classes, and includes specialised pedigree visualisations.

github.com/magnusdv/segregatr
Bug report File report

Key Metrics

Version 0.3.0
R ≥ 4.1.0
Published 2023-06-26 310 days ago
Needs compilation? no
License GPL-3
CRAN checks segregatr results
Language en-GB

Downloads

Yesterday 14 0%
Last 7 days 61 +20%
Last 30 days 204 +1%
Last 90 days 532 -36%
Last 365 days 2.609 +9%

Maintainer

Maintainer

Magnus Dehli Vigeland

m.d.vigeland@medisin.uio.no

Authors

Magnus Dehli Vigeland

aut / cre

Christian Carrizosa

aut

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

segregatr archive

Depends

pedtools ≥ 2.2.0
R ≥ 4.1.0

Imports

pedprobr

Suggests

testthat

Reverse Imports

pedsuite