CRAN/E | saasCNV

saasCNV

Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data

Installation

About

Perform joint segmentation on two signal dimensions derived from total read depth (intensity) and allele specific read depth (intensity) for whole genome sequencing (WGS), whole exome sequencing (WES) and SNP array data.

zhangz05.u.hpc.mssm.edu/saasCNV/

Key Metrics

Version 0.3.4
R ≥ 2.10
Published 2016-05-18 2908 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks saasCNV results

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Maintainer

Maintainer

Zhongyang Zhang

zhongyang.zhang@mssm.edu

Authors

Zhongyang Zhang

aut / cre

Ke Hao

aut

Nancy R. Zhang

ctb

Material

ChangeLog
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 2.10
RANN
DNAcopy