CRAN/E | rrBLUP

rrBLUP

Ridge Regression and Other Kernels for Genomic Selection

Installation

About

Software for genomic prediction with the RR-BLUP mixed model (Endelman 2011, doi:10.3835/plantgenome2011.08.0024). One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.

Citation rrBLUP citation info
<potatobreeding.cals.wisc.edu/software/>

Key Metrics

Version 4.6.3
R ≥ 4.0
Published 2023-12-10 140 days ago
Needs compilation? no
License GPL-3
CRAN checks rrBLUP results

Downloads

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Maintainer

Maintainer

Jeffrey Endelman

endelman@wisc.edu

Authors

Jeffrey Endelman

Material

NEWS
Reference manual
Package source

In Views

Agriculture
MixedModels

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

rrBLUP archive

Depends

R ≥ 4.0

Imports

stats
graphics
grDevices
parallel

Reverse Imports

BWGS
factReg
Ghat
GROAN
PopVar
RAINBOWR
STGS

Reverse Suggests

BG2
dartR
dartR.base
dartR.captive
dartR.spatial
GWAS.BAYES
MoBPS
polyRAD