CRAN/E | rotl

rotl

Interface to the 'Open Tree of Life' API

Installation

About

An interface to the 'Open Tree of Life' API to retrieve phylogenetic trees, information about studies used to assemble the synthetic tree, and utilities to match taxonomic names to 'Open Tree identifiers'. The 'Open Tree of Life' aims at assembling a comprehensive phylogenetic tree for all named species.

Citation rotl citation info
docs.ropensci.org/rotl/
github.com/ropensci/rotl
Bug report File report

Key Metrics

Version 3.1.0
R ≥ 3.1.1
Published 2023-06-15 317 days ago
Needs compilation? no
License BSD_2_clause
License File
CRAN checks rotl results

Downloads

Yesterday 113 -26%
Last 7 days 620 -13%
Last 30 days 3.320 -24%
Last 90 days 11.567 +2%
Last 365 days 52.839 -12%

Maintainer

Maintainer

Francois Michonneau

francois.michonneau@gmail.com

Authors

Francois Michonneau

aut / cre

Joseph Brown

aut

David Winter

aut

Scott Chamberlain

rev

Material

README
NEWS
Reference manual
Package source

In Views

Phylogenetics

Vignettes

Connecting data to Open Tree trees
Using the Open Tree synthesis in a comparative analysis
How to use rotl?

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

rotl archive

Depends

R ≥ 3.1.1

Imports

ape
curl ≥ 3.0.0
httr
jsonlite
rentrez
rlang
rncl ≥0.6.0

Suggests

knitr ≥ 1.12
MCMCglmm
phylobase
readxl
rmarkdown ≥0.7
RNeXML
testthat

Reverse Imports

datelife
OpenTreeChronograms
taxize