CRAN/E | rnmamod

rnmamod

Bayesian Network Meta-Analysis with Missing Participants

Installation

About

A comprehensive suite of functions to perform and visualise pairwise and network meta-analysis with aggregate binary or continuous missing participant outcome data. The package covers core Bayesian one-stage models implemented in a systematic review with multiple interventions, including fixed-effect and random-effects network meta-analysis, meta-regression, evaluation of the consistency assumption via the node-splitting approach and the unrelated mean effects model, and sensitivity analysis. Missing participant outcome data are addressed in all models of the package. The robustness to primary analysis results can also be investigated using a novel intuitive index. Methods to evaluate the transitivity assumption quantitatively are provided. The package also offers a rich, user-friendly visualisation toolkit that aids in appraising and interpreting the results thoroughly and preparing the manuscript for journal submission. The visualisation tools comprise the network plot, forest plots, panel of diagnostic plots, heatmaps on the extent of missing participant outcome data in the network, league heatmaps on estimation and prediction, rankograms, Bland-Altman plot, leverage plot, deviance scatterplot, heatmap of robustness, barplot of Kullback-Leibler divergence, heatmap of comparison dissimilarities and dendrogram of comparison clustering. The package also allows the user to export the results to an Excel file at the working directory.

CRAN.R-project.org/package=rnmamod
github.com/LoukiaSpin/rnmamod
Bug report File report

Key Metrics

Version 0.4.0
R ≥ 4.0.0
Published 2024-03-24 26 days ago
Needs compilation? no
License GPL (≥ 3)
CRAN checks rnmamod results
Language en-US

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Maintainer

Maintainer

Loukia Spineli

Spineli.Loukia@mh-hannover.de

Authors

Loukia Spineli

aut / cre

Chrysostomos Kalyvas

ctb

Katerina Papadimitropoulou

ctb

Material

NEWS
Reference manual
Package source

In Views

MetaAnalysis
MissingData

Vignettes

Description of the network
Perform network meta-analysis

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

rnmamod archive

Depends

R ≥ 4.0.0

Imports

cluster
dendextend
fdrtool
gemtc
ggfittext
ggplot2
ggpubr
ggrepel
heatmaply
igraph
knitr
MASS
mcmcplots
R2jags
reshape2
scales
stringr
writexl

Suggests

rmarkdown
testthat ≥ 3.0.0