CRAN/E | projections

projections

Project Future Case Incidence

Installation

About

Provides functions and graphics for projecting daily incidence based on past incidence, and estimates of the serial interval and reproduction number. Projections are based on a branching process using a Poisson-distributed number of new cases per day, similar to the model used for estimating R in 'EpiEstim' or in 'earlyR', and described by Nouvellet et al. (2017) doi:10.1016/j.epidem.2017.02.012. The package provides the S3 class 'projections' which extends 'matrix', with accessors and additional helpers for handling, subsetting, merging, or adding these objects, as well as dedicated printing and plotting methods.

www.repidemicsconsortium.org/projections/
Bug report File report

Key Metrics

Version 0.6.0
R ≥ 3.5.0
Published 2023-03-23 402 days ago
Needs compilation? no
License MIT
License File
CRAN checks projections results

Downloads

Yesterday 13 -19%
Last 7 days 118 +19%
Last 30 days 418 +6%
Last 90 days 1.198 -10%
Last 365 days 4.971 -6%

Maintainer

Maintainer

Thibaut Jombart

thibautjombart@gmail.com

Authors

Thibaut Jombart

aut / cre

Pierre Nouvellet

aut

Sangeeta Bhatia

ctb

Zhian N. Kamvar

ctb

Tim Taylor

ctb

Stephane Ghozzi

ctb

Material

NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

projections archive

Depends

R ≥ 3.5.0

Imports

stats
utils
incidence ≥ 1.4.1
ggplot2
methods

Suggests

testthat
roxygen2
knitr
rmarkdown
outbreaks
magrittr
distcrete
svglite
EpiEstim

Reverse Suggests

earlyR