CRAN/E | primerTree

primerTree

Visually Assessing the Specificity and Informativeness of Primer Pairs

Installation

About

Identifies potential target sequences for a given set of primers and generates phylogenetic trees annotated with the taxonomies of the predicted amplification products.

Key Metrics

Version 1.0.6
R ≥ 3.5.0
Published 2022-04-05 724 days ago
Needs compilation? yes
License GPL-2
CRAN checks primerTree results

Downloads

Yesterday 15 0%
Last 7 days 47 -20%
Last 30 days 249 -5%
Last 90 days 938 +41%
Last 365 days 3.074 -28%

Maintainer

Maintainer

Matt Cannon

matthewvc1@gmail.com

Authors

Jim Hester

aut

Matt Cannon

aut / cre

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

primerTree archive

Depends

R ≥ 3.5.0
directlabels
gridExtra

Imports

ape
foreach
ggplot2
grid
httr
lubridate
plyr
reshape2
scales
stringr
XML