CRAN/E | poppr

poppr

Genetic Analysis of Populations with Mixed Reproduction

Installation

About

Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package. Originally described in Kamvar, Tabima, and Grünwald (2014) doi:10.7717/peerj.281 with version 2.0 described in Kamvar, Brooks, and Grünwald (2015) doi:10.3389/fgene.2015.00208.

Citation poppr citation info
grunwaldlab.github.io/poppr/
github.com/grunwaldlab/poppr/
grunwaldlab.github.io/Population_Genetics_in_R/
Mailing list https://groups.google.com/d/forum/poppr
Bug report File report

Key Metrics

Version 2.9.4
R ≥ 2.15.1
Published 2023-03-23 258 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks poppr results

Downloads

Last 24 hours 0 -100%
Last 7 days 790 -7%
Last 30 days 3.083 +6%
Last 90 days 9.161 -36%
Last 365 days 46.642 -40%

Maintainer

Maintainer

Zhian N. Kamvar

zkamvar@gmail.com

Authors

Zhian N. Kamvar

cre / aut

Javier F. Tabima

aut

Sydney E. Everhart

ctb / dtc

Jonah C. Brooks

aut

Stacy A. Krueger-Hadfield

ctb

Erik Sotka

ctb

Brian J. Knaus

ctb

Patrick G. Meirmans

ctb

Frédéric D. Chevalier

ctb

David Folarin

aut

Niklaus J. Grünwald

ths

Material

README
NEWS
Reference manual
Package source

In Views

Agriculture

Vignettes

Algorightms and Equations

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

poppr archive

Depends

R ≥ 2.15.1
adegenet ≥ 2.0.0

Imports

stats
graphics
grDevices
utils
vegan
ggplot2
ape ≥3.1-1
igraph ≥ 1.0.0
methods
ade4
pegas
polysat
dplyr ≥ 0.4
rlang
boot
shiny
magrittr
progressr

Suggests

testthat
knitr
rmarkdown
poweRlaw
cowplot

Reverse Imports

PopGenHelpR

Reverse Suggests

adegenet
AlleleShift
dartR
vcfR