plinkFile

Reads/write binary genotype file compatible with 'PLINK' https://www.cog-genomics.org/plink/1.9/input#bed into/from a R matrix; traverse genotype data one windows of variants at a time, like apply() or a for loop; reads/writes genotype relatedness/kinship matrices created by 'PLINK' https://www.cog-genomics.org/plink/1.9/distance#make_rel or 'GCTA' https://cnsgenomics.com/software/gcta/#MakingaGRM into/from a R square matrix. It is best used for bringing data produced by 'PLINK' and 'GCTA' into R workflow.

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