CRAN/E | perfectphyloR

perfectphyloR

Reconstruct Perfect Phylogenies from DNA Sequence Data

Installation

About

Reconstructs perfect phylogeny at a user-given focal point and to depict and test association in a genomic region based on the reconstructed partitions. Charith B Karunarathna and Jinko Graham (2019) .

Key Metrics

Version 0.2.1
R ≥ 3.4.0
Published 2021-03-08 1151 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks perfectphyloR results

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Maintainer

Maintainer

Charith Karunarathna

ckarunar@sfu.ca

Authors

Charith Karunarathna
Jinko Graham

Material

README
Reference manual
Package source

Vignettes

perfectphyloR: Reconstruct Perfect Phylogenies from DNA Sequence Data

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

perfectphyloR archive

Depends

R ≥ 3.4.0

Imports

ape
phytools
Rcpp ≥ 0.12.16

Suggests

HHG
dendextend
vcfR
R.rsp

LinkingTo

Rcpp
RcppArmadillo