CRAN/E | pafr

pafr

Read, Manipulate and Visualize 'Pairwise mApping Format' Data

Installation

About

Provides functions to read, process and visualize pairwise sequence alignments in the 'PAF' format used by 'minimap2' and other whole-genome aligners. 'minimap2' is described by Li H. (2018) doi:10.1093/bioinformatics/bty191.

dwinter.github.io/pafr/
Bug report File report

Key Metrics

Version 0.0.2
R ≥ 3.4.4
Published 2020-12-08 1234 days ago
Needs compilation? no
License MIT
License File
CRAN checks pafr results

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Maintainer

Maintainer

David Winter

david.winter@gmail.com

Authors

David Winter

aut / cre

Kate Lee

ctb

Murray Cox

ctb

Material

README
NEWS
Reference manual
Package source

Vignettes

pafr_tutorial

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.4.4
ggplot2

Imports

dplyr
tibble
stringr
rlang

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