CRAN/E | otuSummary

otuSummary

Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres

Installation

About

Summarizes the taxonomic composition, diversity contribution of the rare and abundant community by using OTU (operational taxonomic unit) table which was generated by analyzing pipeline of 'QIIME' or 'mothur'. The rare biosphere in this package is subset by the relative abundance threshold (for details about rare biosphere please see Lynch and Neufeld (2015) doi:10.1038/nrmicro3400).

github.com/cam315/otuSummary

Key Metrics

Version 0.1.2
R ≥ 3.5.0
Published 2023-09-05 237 days ago
Needs compilation? no
License GPL (≥ 3)
CRAN checks otuSummary results

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Maintainer

Maintainer

Sizhong Yang

yanglzu@163.com

Authors

Sizhong Yang

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

otuSummary archive

Depends

R ≥ 3.5.0

Imports

reshape2 ≥ 1.4

Reverse Imports

stppSim