CRAN/E | nucim

nucim

Nucleome Imaging Toolbox

Installation

About

Tools for 4D nucleome imaging. Quantitative analysis of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy. See Volker J. Schmid, Marion Cremer, Thomas Cremer (2017) doi:10.1016/j.ymeth.2017.03.013.

Citation nucim citation info
bioimaginggroup.github.io/nucim/
System requirements tiff fftw libcurl openssl
Bug report File report

Key Metrics

Version 1.0.11
R ≥ 3.0.0
Published 2021-06-10 1063 days ago
Needs compilation? no
License GPL-3
CRAN checks nucim results

Downloads

Yesterday 3 -67%
Last 7 days 44 -48%
Last 30 days 175 -3%
Last 90 days 498 -33%
Last 365 days 2.234 -38%

Maintainer

Maintainer

Volker Schmid

volker.schmid@lmu.de

Authors

Volker Schmid

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

Chromatin compaction classification using DAPI intensity
Workflow for nucleome analysis of many 3D SIM images
Workflow for 3D SIM nucleome analysis

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

nucim archive

Depends

R ≥ 3.0.0
EBImage
bioimagetools ≥ 1.1.4

Imports

fields
parallel
stringr

Suggests

knitr
rmarkdown
R.rsp