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Carry out network-based gene set analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data. Implements methods described in Shojaie A, Michailidis G (2010) doi:10.1093/biomet/asq038, Shojaie A, Michailidis G (2009) doi:10.1089/cmb.2008.0081, and Ma J, Shojaie A, Michailidis G (2016) doi:10.1093/bioinformatics/btw410.
| github.com/mikehellstern/netgsa |
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