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Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) doi:10.1371/journal.pone.0153844. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.
| Citation | nanostringr citation info |
| github.com/TalhoukLab/nanostringr/ | |
| talhouklab.github.io/nanostringr/ | |
| Bug report | File report |
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