CRAN/E | multimark

multimark

Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks

Installation

About

Traditional and spatial capture-mark-recapture analysis with multiple non-invasive marks. The models implemented in 'multimark' combine encounter history data arising from two different non-invasive "marks", such as images of left-sided and right-sided pelage patterns of bilaterally asymmetrical species, to estimate abundance and related demographic parameters while accounting for imperfect detection. Bayesian models are specified using simple formulae and fitted using Markov chain Monte Carlo. Addressing deficiencies in currently available software, 'multimark' also provides a user-friendly interface for performing Bayesian multimodel inference using non-spatial or spatial capture-recapture data consisting of a single conventional mark or multiple non-invasive marks. See McClintock (2015) doi:10.1002/ece3.1676 and Maronde et al. (2020) doi:10.1002/ece3.6990.

Citation multimark citation info

Key Metrics

Version 2.1.6
R ≥ 3.2.1
Published 2023-03-10 422 days ago
Needs compilation? yes
License GPL-2
CRAN checks multimark results

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Maintainer

Maintainer

Brett T. McClintock

brett.mcclintock@noaa.gov

Authors

Brett T. McClintock

aut / cre

Acho Arnold

ctb / cph

(C original matrix library, https://github.com/najela/matrix.h)

Barry Brown

ctb

(Fortran original ranlib library)

James Lovato

ctb

(Fortran original ranlib library)

John Burkardt

ctb

(C original ranlib library, http://people.sc.fsu.edu/~jburkardt/c_src/ranlib)

Cleve Moler

ctb

(C original linpack library, http://www.kkant.net/geist/ranlib/)

Arjun Gopalaswamy

ctb

(modified snippets of R package SPACECAP code)

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

multimark archive

Depends

R ≥ 3.2.1

Imports

parallel
Matrix
coda
statmod
RMark
Brobdingnag
mvtnorm
graphics
methods
stats
utils
prodlim
sp
raster

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