CRAN/E | missoNet

missoNet

Missingness in Multi-Task Regression with Network Estimation

Installation

About

Efficient procedures for fitting conditional graphical lasso models that link a set of predictor variables to a set of response variables (or tasks), even when the response data may contain missing values. 'missoNet' simultaneously estimates the predictor coefficients for all tasks by leveraging information from one another, in order to provide more accurate predictions in comparison to modeling them individually. Additionally, 'missoNet' estimates the response network structure influenced by conditioning predictor variables in a L1-regularized conditional Gaussian graphical model. Unlike most penalized multi-task regression methods (e.g., MRCE), 'missoNet' is capable of obtaining estimates even when the response data is corrupted by missing values. The method automatically enjoys the theoretical and computational benefits of convexity, and returns solutions that are comparable to the estimates obtained without any missing values. The package also includes auxiliary functions for data simulation, adaptive model initialization, hyper-parameter tuning, goodness-of-fit evaluation, and visualization of estimates, as well as predictions in new data.

github.com/yixiao-zeng/missoNet
Bug report File report

Key Metrics

Version 1.1.0
Published 2023-05-11 341 days ago
Needs compilation? yes
License GPL-2
CRAN checks missoNet results

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Maintainer

Maintainer

Yixiao Zeng

yixiao.zeng@mail.mcgill.ca

Authors

Yixiao Zeng

aut / cre / cph

Celia Greenwood

ths / aut

Archer Yang

ths / aut

Material

README
NEWS
Reference manual
Package source

Vignettes

An Introduction to missoNet

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

missoNet archive

Imports

circlize ≥ 0.4.14
ComplexHeatmap
glasso ≥ 1.11
glmnet ≥ 4.1.4
mvtnorm ≥ 1.1.3
pbapply ≥ 1.5.0
Rcpp ≥1.0.8.3
scatterplot3d ≥ 0.3.41

Suggests

knitr
rmarkdown

LinkingTo

Rcpp
RcppArmadillo