CRAN/E | microhaplot

microhaplot

Microhaplotype Constructor and Visualizer

Installation

About

A downstream bioinformatics tool to construct and assist curation of microhaplotypes from short read sequences.

github.com/ngthomas/microhaplot
Bug report File report

Key Metrics

Version 1.0.1
R ≥ 3.1.2
Published 2019-10-03 1667 days ago
Needs compilation? no
License GPL-3
CRAN checks microhaplot results

Downloads

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Last 7 days 46 +77%
Last 30 days 141 -2%
Last 90 days 409 -36%
Last 365 days 1.863 -25%

Maintainer

Maintainer

Thomas Ng

tngthomasng@gmail.com

Authors

Thomas Ng

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

microhaplot data prep
microhaplot walkthrough
Package Troubleshoot

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.1.2

Imports

DT ≥ 0.1
dplyr ≥ 0.4.3
ggplot2 ≥ 2.1.0
grid ≥3.1.2
gtools ≥ 3.5.0
magrittr ≥ 1.5
scales ≥0.4.0
shiny ≥ 0.13.2
shinyBS ≥ 0.61
tidyr ≥ 0.4.1
shinyWidgets ≥ 0.4.3
ggiraph ≥ 0.6.0

Suggests

knitr
rmarkdown