CRAN/E | metabolomicsR

metabolomicsR

Tools for Metabolomics Data

Installation

About

Tools to preprocess, analyse, and visualize metabolomics data. We included a set of functions for sample and metabolite quality control, outlier detection, missing value imputation, dimensional reduction, normalization, data integration, regression, metabolite annotation, enrichment analysis, and visualization of data and results. The package is designed to be a comprehensive R package that can be easily used by researchers with basic R programming skills. The framework designed here is versatile and is extensible to other various methods.

github.com/XikunHan/metabolomicsR

Key Metrics

Version 1.0.0
R ≥ 4.1
Published 2022-04-29 728 days ago
Needs compilation? no
License GPL-2
CRAN checks metabolomicsR results

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Maintainer

Maintainer

Xikun Han

hanxikun2017@gmail.com

Authors

Xikun Han

cre / aut

Material

README
NEWS
Reference manual
Package source

Vignettes

An introduction to the metabolomicsR

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

methods
R ≥ 4.1

Imports

ggplot2
data.table
plotROC
utils
stats

Suggests

ggthemes
knitr
rmarkdown
testthat ≥ 3.0.0
lme4
nlme
broom
reshape2
impute
M3C
FNN
RColorBrewer
readxl
survival
future
pbapply
future.apply
progressr
ggrepel
here
genuMet
ggstatsplot
cowplot
pROC
BiocStyle
MASS
xgboost