CRAN/E | metaCluster

metaCluster

Metagenomic Clustering

Installation

About

Clustering in metagenomics is the process of grouping of microbial contigs in species specific bins. This package contains functions that extract genomic features from metagenome data, find the number of clusters for that given data and find the best clustering algorithm for binning.

Key Metrics

Version 0.1.0
R ≥ 3.6
Published 2021-09-30 941 days ago
Needs compilation? no
License GPL-3
CRAN checks metaCluster results

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Maintainer

Maintainer

Dipro Sinha

diprosinha@gmail.com

Authors

Dipro Sinha

aut / cre

Sayanti Guha Majumdar

aut

Anu Sharma

aut

Dwijesh Chandra Mishra

aut

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.6

Imports

factoextra
cluster
dbscan
dplyr
seqinr
Biostrings