CRAN/E | malan

malan

MAle Lineage ANalysis

Installation

About

MAle Lineage ANalysis by simulating genealogies backwards and imposing short tandem repeats (STR) mutations forwards. Intended for forensic Y chromosomal STR (Y-STR) haplotype analyses. Numerous analyses are possible, e.g. number of matches and meiotic distance to matches. Refer to papers mentioned in citation("malan") (DOI's: doi:10.1371/journal.pgen.1007028, doi:10.21105/joss.00684 and doi:10.1016/j.fsigen.2018.10.004).

Citation malan citation info
Bug report File report

Key Metrics

Version 1.0.3
R ≥ 3.6
Published 2023-11-28 143 days ago
Needs compilation? yes
License GPL-2
License File
CRAN checks malan results

Downloads

Yesterday 4
Last 7 days 16 -41%
Last 30 days 156 -12%
Last 90 days 740 +8%
Last 365 days 2.219 +8%

Maintainer

Maintainer

Mikkel Meyer Andersen

mikl@math.aau.dk

Authors

Mikkel Meyer Andersen

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

Case study: Partial profiles
Introduction

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

malan archive

Depends

R ≥ 3.6
dplyr ≥ 0.7.3
tidygraph ≥ 1.0.0.9999

Imports

Rcpp ≥ 0.12.7
RcppProgress ≥ 0.2.1
RcppArmadillo ≥0.9.880.1.0
igraph ≥ 1.0.1
tibble ≥ 1.1
magrittr ≥1.5
methods

Suggests

knitr
rmarkdown
testthat
ggraph
dirmult
Rmpfr

LinkingTo

Rcpp
RcppArmadillo
RcppProgress