CRAN/E | mSigTools

mSigTools

Mutational Signature Analysis Tools

Installation

About

Utility functions for mutational signature analysis as described in Alexandrov, L. B. (2020) doi:10.1038/s41586-020-1943-3. This package provides two groups of functions. One is for dealing with mutational signature "exposures" (i.e. the counts of mutations in a sample that are due to each mutational signature). The other group of functions is for matching or comparing sets of mutational signatures. 'mSigTools' stands for mutational Signature analysis Tools.

Citation mSigTools citation info
github.com/Rozen-Lab/mSigTools
Bug report File report

Key Metrics

Version 1.0.7
Published 2023-01-13 476 days ago
Needs compilation? no
License GPL-3
CRAN checks mSigTools results
Language en-US

Downloads

Yesterday 7 -30%
Last 7 days 58 -11%
Last 30 days 193 +4%
Last 90 days 499 -23%
Last 365 days 2.167 +31%

Maintainer

Maintainer

Steven Rozen

steverozen@pm.me

Authors

Steven Rozen

aut / cre

Nanhai Jiang

aut

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

mSigTools archive

Imports

clue
philentropy
quadprog
sets

Suggests

cosmicsig
ICAMS
spelling
testthat ≥ 3.0.0