CRAN/E | cosmicsig

cosmicsig

Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer)

Installation

About

A data package with 2 main package variables: 'signature' and 'etiology'. The 'signature' variable contains the latest mutational signature profiles released on COSMIC for 3 mutation types: * Single base substitutions in the context of preceding and following bases, * Doublet base substitutions, and * Small insertions and deletions. The 'etiology' variable provides the known or hypothesized causes of signatures. 'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more information.

Citation cosmicsig citation info
github.com/Rozen-Lab/cosmicsig
Bug report File report

Key Metrics

Version 1.1.1
R ≥ 3.5
Published 2023-08-30 249 days ago
Needs compilation? no
License GPL-3
CRAN checks cosmicsig results
Language en-US

Downloads

Yesterday 10 0%
Last 7 days 64 -16%
Last 30 days 234 -5%
Last 90 days 657 -28%
Last 365 days 2.918 +4%

Maintainer

Maintainer

Steven Rozen

steverozen@pm.me

Authors

Steven Rozen

aut / cre

Nanhai Jiang

aut

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

cosmicsig archive

Depends

R ≥ 3.5

Suggests

testthat ≥ 3.0.0
ICAMS
usethis

Reverse Suggests

mSigTools