CRAN/E | lipidomeR

lipidomeR

Integrative Visualizations of the Lipidome

Installation

About

Create lipidome-wide heatmaps of statistics with the 'lipidomeR'. The 'lipidomeR' provides a streamlined pipeline for the systematic interpretation of the lipidome through publication-ready visualizations of regression models fitted on lipidomics data. With 'lipidomeR', associations between covariates and the lipidome can be interpreted systematically and intuitively through heatmaps, where lipids are categorized by the lipid class and are presented on two-dimensional maps organized by the lipid size and level of saturation. This way, the 'lipidomeR' helps you gain an immediate understanding of the multivariate patterns in the lipidome already at first glance. You can create lipidome-wide heatmaps of statistical associations, changes, differences, variation, or other lipid-specific values. The heatmaps are provided with publication-ready quality and the results behind the visualizations are based on rigorous statistical models.

tommi-s.github.io/

Key Metrics

Version 0.1.2
R ≥ 3.5.0
Published 2020-03-15 1511 days ago
Needs compilation? no
License GPL-3
CRAN checks lipidomeR results

Downloads

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Maintainer

Maintainer

Tommi Suvitaival

TSUV0001@RegionH.DK

Authors

Tommi Suvitaival

aut / cre

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.5.0

Imports

BiocManager
dplyr
ggplot2
knitr
limma
reshape2
shadowtext
stringr
tableone
tidyr