CRAN/E | leiden

leiden

R Implementation of Leiden Clustering Algorithm

Installation

About

Implements the 'Python leidenalg' module to be called in R. Enables clustering using the leiden algorithm for partition a graph into communities. See the 'Python' repository for more details: Traag et al (2018) From Louvain to Leiden: guaranteeing well-connected communities. .

Citation leiden citation info
github.com/TomKellyGenetics/leiden
Bug report File report

Key Metrics

Version 0.4.3.1
Published 2023-11-17 154 days ago
Needs compilation? no
License GPL-3
License File
CRAN checks leiden results
Language en-US

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Maintainer

Maintainer

S. Thomas Kelly

tomkellygenetics@gmail.com

Authors

S. Thomas Kelly

aut / cre / trl

Vincent A. Traag

com

Material

NEWS
Reference manual
Package source

Vignettes

Benchmarking the Leiden algorithm
Running the Leiden algorithm with R on bipartite graphs
Running the Leiden algorithm with R on Graph Objects
Running the Leiden algorithm with R on adjacency matrices
Running the Leiden algorithm with R on multiplex graphs

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

leiden archive

Imports

methods
reticulate
Matrix
igraph ≥ 1.2.7

Suggests

bipartite
covr
data.table
devtools
graphsim
knitr
markdown
multiplex
multinet
network
qpdf
RColorBrewer
remotes
rmarkdown
spelling
testthat
tibble

Reverse Imports

RaceID
Seurat

Reverse Suggests

FCPS